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Perldl shell


NAME

perldl - Simple shell for PDL (see also the pdl2 manpage)


SYNOPSIS

Use PDL interactively:

  bash$ perldl
  pdl> $a = sequence(10) # or any other perl or PDL command
  
  bash$ pdl
  pdl> print "Hello, world!\n";

Run a script:

  bash$ cat > pdlscript
  #!/usr/bin/pdl
  print "Hello, world!\n";
  ...


DESCRIPTION

The program perldl is a simple shell (written in perl) for interactive use of PDL. It consists of a command-line interface that supports immediate interpretation of perl commands and expressions. Perl expressions, including PDL constructs, can be entered directly at the keyboard and are compiled and executed immediately. The syntax is not exactly identical to Perl, in that under most circumstances ending a line causes immediate execution of the command entered so far (no trailing ';' is required).

The synonym pdl is a compiled executable that is useful as a script interpreter using UNIX shebang (#!) syntax. This is useful for generating and re-executing command-journal files from perldl.

The perldl shell runs an initial startup file (~/.perldlrc) that can be used to pre-load perl modules or configure the global perl environment. It features a path mechanism for autoloading perl subroutines. There is a command-history mechanism, and several other useful features such as command preprocessing, shortcuts for commonly used commands such as "print", and the ability to execute arbitrary code whenever a prompt is printed.

Depending on your configuration settings, perldl can be set to honor or ignore the ^D (end-of-file) character when sent from a terminal, or to attempt to do the Right Thing when a block construct spanning multiple lines is encountered.

perldl and pdl support several command-line options, which are discussed near the end of this document.

Reference manual & online help

The PDL reference manual and online help are available from within perldl, using the help and apropos commands (which may also be abbreviated ? and ??.) The help command alone prints a summary of help syntax, and help <module-name >> will print POD documentation from the module you mention (POD is the Perl format for embedding documentation in your perl code; see perlpod for details).

If you include POD documentation in your autoload subroutines (see path mechanism below), then both help and apropos will find it and be able to format and display it on demand.

History mechanism

If you have the perl modules ReadLines and ReadKeys installed, then perldl supports a history and line-editing mechanism using editing keys similar to emacs. The last 500 commands are always stored in the file .perldl_hist in your home directory between sessions. Set $PERLDL::HISTFILESIZE to change the number of lines saved. The command l [number] shows you the last number commands you typed where number defaults to 20.

e.g.:

   bash$ perldl
   ReadLines enabled
   pdl> $a = rfits "foo.fits"
   BITPIX =  -32  size = 88504 pixels
   Reading  354016 bytes
   BSCALE =  &&  BZERO =
   pdl> imag log($a+400)
   Displaying 299 x 296 image from 4.6939525604248 to 9.67116928100586 ...

Command execution

If you enter a simple command at the perldl command line, it is immediately executed in a Perl eval(). The environment is almost identical to that within a perl script, with some important exceptions:

If you want to preserve this behavior in a script (for example to replay a command journal file; see below on how to create one), you can use pdl instead of perl as the interpreter in the script's initial shebang line.

Terminating perldl

A perldl session can be terminated with any of the commands quit, exit or the shorthands x or q. If EOF handling is switched on (the default) you can also type ^D at the command prompt.

If the command input is NOT a terminal (for example if you are running from a command journal file), then EOF will always terminate perldl.

Terminating commands (Ctrl-C handling)

Commands executed within perldl can be terminated prematurely using Ctrl-C (or whichever key sequence sends an INT signal to the process on your terminal). Provided your PDL code does not ignore sigints this should throw you back at the perldl command prompt:

  pdl> $result = start_lengthy_computation()
   <Ctrl-C>
 Ctrl-C detected
  pdl>

Shortcuts and aliases

Command-line options

perldl and pdl support several command-line options to adjust the behavior of the session. Most of them are equivalent to commands that can be entered at the pdl> prompt. They are:

-glut

Load OpenGL when starting the shell (the perl OpenGL module, which is available from CPAN must be installed). This enables readline event loop processing. Don't use with -tk.

-tk

Load Tk when starting the shell (the perl Tk module, which is available from CPAN must be installed). This enables readline event loop processing. Don't use with -glut.

-f file

Loads the file before processing any user input. Any errors during the execution of the file are fatal.

-w

Runs with warning messages (i.e. the normal perl -w warnings) turned-on.

-M module

Loads the module before processing any user input. Compare corresponding perl switch.

-m module

Unloads the module before processing any user input.

-I directory

Adds directory to the include path. (i.e. the @INC array) Compare corresponding perl switch.

-V

Prints a summary of PDL config. This information should be included with any PDL bug report. Compare corresponding perl switch.

The startup file ~/.perldlrc

If the file ~/.perldlrc is found it is sourced at start-up to load default modules, set shell variables, etc. If it is NOT found the distribution file PDL/default.perldlrc is read instead. This loads various modules considered useful by default, and which ensure compatibility with v1.11. If you don't like this and want a more streamlined set of your own favourite modules simple create your own ~/.perldlrc. You may wish to start from the existing PDL/default.perldlrc as a template since it will not be sourced once you replace it with your own version.

To set even more local defaults the file local.perldlrc (in the current directory) is sourced if found. This lets you load modules and define subroutines for the project in the current directory.

The name is chosen specfically because it was found hidden files were NOT wanted in these circumstances.

The startup file should normally include "use PDL::AutoLoader;", as many of the nicer interactive features won't work without it.

Shell variables

Shell variables: (Note: if you don't like the defaults change them in ~/.perldlrc)

Executing scripts from the perldl prompt

A useful idiom for developing perldl scripts or editing functions on-line is

  pdl> # emacs script &
    -- add perldl code to script and save the file
  
  pdl> do 'script'

-- substitute your favourite window-based editor for 'emacs' (you may also need to change the '&' on non-Unix systems).

Running "do 'script'" again updates any variables and function definitions from the current version of 'script'.

Executing perldl scripts from the command line

PDL scripts are just perl scripts that happen to use PDL (and possibly PDL::NiceSlice). But for the truly lazy, perldl can be invokes as a script interpreter. Because perldl is itself an interpreted perl script, most unices won't allow you to say "#!/usr/bin/perldl" at the top of your script.

Instead, say "#!/usr/bin/pdl" and your script will be executed exactly as if you typed it, line-by-line, into the perldl shell.

Command preprocessing

NOTE: This feature is used by default by PDL::NiceSlice. See below for more about slicing at the perldl prompt

In some cases, it is convenient to process commands before they are sent to perl for execution. For example, this is the case where the shell is being presented to people unfamiliar with perl but who wish to take advantage of commands added locally (eg by automatically quoting arguments to certain commands).

*NOTE*: The preprocessing interface has changed from earlier versions! The old way using $PERLDL::PREPROCESS will still work but is strongly deprecated and might go away in the future.

You can enable preprocessing by registering a filter with the preproc_add function. preproc_add takes one argument which is the filter to be installed. A filter is a Perl code reference (usually set in a local configuration file) that will be called, with the current command string as argument, just prior to the string being executed by the shell. The modified string should be returned. Note that you can make perldl completely unusable if you fail to return the modified string; quitting is then your only option.

Filters can be removed from the preprocessing pipeline by calling preproc_del with the filter to be removed as argument. To find out if a filter is currently installed in the preprocessing pipeline use preproc_registered:

  pdl> preproc_add $myfilter unless preproc_registered $myfilter;

Previous versions of perldl used the variable $PERLDL::PREPROCESS. This will still work but should be avoided. Please change your scripts to use the preproc_add etc functions.

The following code would check for a call to function 'mysub' and bracket arguments with qw.

  $filter = preproc_add sub {
     my $str = shift;
     $str =~ s/^\s+//;  # Strip leading space
     if ($str =~ /^mysub/) {
        my ($command, $arguments) = split(/\s+/,$str, 2);
        $str = "$command qw( $arguments )" 
        if (defined $arguments && $arguments !~ /^qw/);
     };
     # Return the input string, modified as required
     return $str;
   };

This would convert:

  pdl> mysub arg1 arg2

to

  pdl> mysub qw( arg1 arg2 )

which Perl will understand as a list. Obviously, a little more effort is required to check for cases where the caller has supplied a normal list (and so does not require automatic quoting) or variable interpolation is required.

You can remove this preprocessor using the preproc_del function which takes one argument (the filter to be removed, it must be the same coderef that was returned from a previous preproc_add call):

  pdl> preproc_del $filter;

An example of actual usage can be found in the perldl script. Look at the function trans to see how the niceslicing preprocessor is enabled/disabled.

perldl and PDL::NiceSlice

PDL::NiceSlice introduces a more convenient slicing syntax for piddles. In current versions of perldl and pdl2 niceslicing is enabled by default (if the required CPAN modules are installed on your machine).

At startup perldl will let you know if niceslicing is enabled. The startup message will contain info to this end, something like this:

   perlDL shell v1.XX
    PDL comes with ABSOLUTELY NO WARRANTY. For details, see the file
    'COPYING' in the PDL distribution. This is free software and you
    are welcome to redistribute it under certain conditions, see
    the same file for details.
   ReadLines, NiceSlice  enabled
   Reading /home/csoelle/.perldlrc...
   Type 'demo' for online demos
   Loaded PDL v2.XX

When you get such a message that indicates NiceSlice is enabled you can use the enhanced slicing syntax:

  pdl> $a = sequence 10;
  pdl> p $a(3:8:2)

For details consult the PDL::NiceSlice manpage.

PDL::NiceSlice installs a filter in the preprocessing pipeline (see above) to enable the enhanced slicing syntax. You can use a few commands in the perldl shell to switch this preprocessing on or off and also explicitly check the substitutions that the NiceSlice filter makes.

You can switch the PDL::NiceSlice filter on and off by typing

  pdl> trans # switch niceslicing on

and

  pdl> notrans # switch niceslicing off

respectively. The filter is on by default.

To see how your commands are translated switch reporting on:

  pdl> report 1;
  pdl> p $a(3:8:2)
  processed p $a->nslice([3,8,2])
  [3 5 7]

Similarly, switch reporting off as needed

  pdl> report 0;
  pdl>  p $a(3:8:2)
  [3 5 7]

Reporting is off by default.

Automatically execute your own hooks

The variable @PERLDL::AUTO is a simple list of perl code strings and/or code reference. It is used to define code to be executed automatically every time the user enters a new line.

A simple example would be to print the time of each command:

  pdl> push @PERLDL::AUTO,'print scalar(gmtime),"\n"'
  
  pdl> print zeroes(3,3)
  Sun May  3 04:49:05 1998
  
  [
   [0 0 0]
   [0 0 0]
   [0 0 0]
  ]
  
  pdl> print "Boo"
  Sun May  3 04:49:18 1998
  Boo
  pdl>

Or to make sure any changes in the file 'local.perldlrc' are always picked up :-

  pdl> push @PERLDL::AUTO,"do 'local.perldlrc'"

This code can of course be put *in* 'local.perldlrc', but be careful :-) [Hint: add unless ($started++) to above to ensure it only gets done once!]

Another example application is as a hook for Autoloaders (e.g. PDL::AutoLoader) to add code too which allows them to automatically re-scan their files for changes. This is extremely convenient at the interactive command line. Since this hook is only in the shell it imposes no inefficiency on PDL scripts.

Finally note this is a very powerful facility - which means it should be used with caution!